Disease: Multiple Sclerosis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs3134943
AGPAT1 ; MIR6833 ; RNF5
0.882 0.240 6 32179984 intron variant T/A;C snv 0.89 3
rs2227956
HSPA1L
0.752 0.400 6 31810495 missense variant G/A;C;T snv 0.87 12
rs3129941
TSBP1 ; TSBP1-AS1
0.882 0.240 6 32369909 missense variant A/G;T snv 0.81 3
rs535586
EHMT2 ; CYP21A2
0.882 0.160 6 31892560 splice region variant T/A;C snv 0.77 3
rs486416
CYP21A2 ; EHMT2
0.925 0.160 6 31888293 intron variant G/A snv 0.77 0.76 2
rs659445
EHMT2 ; CYP21A2 ; C2
0.882 0.160 6 31896527 intron variant G/A;C snv 0.77 0.76 3
rs437179
SKIV2L ; CYP21A2
0.882 0.160 6 31961237 missense variant A/C snv 0.76 0.78 3
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80 52
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1061170
CFH
0.561 0.720 1 196690107 missense variant C/T snv 0.68 0.64 72
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs2501432
CNR2
0.716 0.480 1 23875430 missense variant T/C;G snv 0.62 16
rs9268832
HLA-DRB9
0.882 0.160 6 32460012 non coding transcript exon variant T/C snv 0.61 0.59 4
rs660550
SLC44A4 ; CYP21A2
0.882 0.160 6 31869500 intron variant C/A;G snv 0.60 3
rs2242665
CYP21A2 ; SLC44A4
0.882 0.160 6 31871532 missense variant C/T snv 0.60 0.60 3
rs644827
SLC44A4 ; CYP21A2
0.882 0.160 6 31870664 missense variant T/C snv 0.60 0.60 3
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs9268831
HLA-DRB9
0.851 0.280 6 32459971 non coding transcript exon variant C/T snv 0.54 0.51 4
rs1884444
IL23R ; C1orf141
0.637 0.600 1 67168129 missense variant G/T snv 0.52 0.51 34
rs2073618
COLEC10 ; TNFRSF11B
0.716 0.480 8 118951813 missense variant G/C snv 0.52 0.60 19
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52 21
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45 33
rs1801394
FASTKD3 ; MTRR
0.531 0.840 5 7870860 missense variant A/G snv 0.47 0.45 101